1y39: virtual backbone torsions, dot-bracket notation, sugar puckers, glycosidic bond, suiteness calculated using X3DNA-DSSR
# | dbn | Residue | PTPoutlier | puckering | sugar class | Glyco | Eta | Theta | Eta' | Theta' | Eta" | Theta" | Suiteness |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ( | 1..C.GTP.101. | C3'-endo | ~C3'-endo | anti | 0 | |||||||
2 | ( | 1..C.C.102. | C3'-endo | ~C3'-endo | anti | 167.222 | 225.758 | 181.622 | 223.323 | 240.71 | 243.911 | 0 | |
3 | ( | 1..C.C.103. | C3'-endo | ~C3'-endo | anti | 167.409 | 215.328 | 177.542 | 218.766 | 216.392 | 242.349 | 0.484 | |
4 | ( | 1..C.A.104. | C3'-endo | ~C3'-endo | anti | 170.974 | 221.094 | 187.542 | 213.017 | 227.071 | 229.476 | 0.65 | |
5 | ( | 1..C.G.105. | C3'-endo | ~C3'-endo | anti | 165.272 | 225.635 | 175.95 | 228.733 | 209.895 | 287.292 | 0.391 | |
6 | . | 1..C.G.106. | C3'-endo | ~C3'-endo | anti | 156.428 | 61.847 | 182.214 | 65.135 | 262.655 | 91.665 | 0.419 | |
7 | ( | 1..C.A.107. | C3'-endo | ~C3'-endo | anti | 166.42 | 224.584 | 190.007 | 220.184 | 194.512 | 257.698 | 0 | |
8 | ( | 1..C.U.108. | C3'-endo | ~C3'-endo | anti | 159.238 | 198.806 | 173.707 | 201.992 | 232.633 | 202.484 | 0.565 | |
9 | ( | 1..C.G.109. | C3'-endo | ~C3'-endo | anti | 174.991 | 331.337 | 177.717 | 293.133 | 181.887 | 238.797 | 0.782 | |
10 | . | 1..C.U.110. | C2'-endo | ~C2'-endo | anti | 66.205 | 165.543 | 130.074 | 105.499 | 109.166 | 95.475 | 0.623 | |
11 | . | 1..C.A.111. | *** | C2'-endo | ~C2'-endo | anti | 27.629 | 338.133 | 29.938 | 284.725 | 19.426 | 201.356 | 0.173 |
12 | ( | 1..C.U.112. | C3'-endo | ~C3'-endo | anti | 258.594 | 232.705 | 319.62 | 233.121 | 58.076 | 272.367 | 0.059 | |
13 | ( | 1..C.G.113. | C3'-endo | ~C3'-endo | anti | 166.478 | 230.372 | 182.602 | 233.785 | 245.385 | 261.741 | 0.916 | |
14 | ( | 1..C.C.114. | C3'-endo | ~C3'-endo | anti | 172.352 | 220.642 | 192.192 | 225.966 | 238.59 | 275.258 | 0.906 | |
15 | . | 1..C.U.115. | C3'-endo | ~C3'-endo | anti | 171.051 | 236.374 | 196.178 | 233.066 | 263.028 | 275.677 | 0.822 | |
16 | . | 1..C.U.116. | C3'-endo | ~C3'-endo | anti | 160.667 | 237.954 | 182.137 | 197.009 | 247.494 | 143.922 | 0.747 | |
17 | . | 1..C.A.117. | C3'-endo | ~C3'-endo | anti | 29.824 | 233.808 | 49.786 | 235.5 | 24.7 | 293.62 | 0.32 | |
18 | . | 1..C.G.118. | C3'-endo | ~C3'-endo | anti | 163.484 | 237.529 | 182.302 | 243.034 | 253.524 | 199.208 | 0.713 | |
19 | . | 1..C.A.119. | C2'-endo | ~C2'-endo | anti | 164.461 | 100.933 | 195.756 | 65.459 | 157.104 | 47.033 | 0.172 | |
20 | . | 1..C.A.120. | *** | C2'-endo | ~C2'-endo | anti | 137.9 | 5.702 | 129.486 | 328.733 | 111.121 | 249.705 | 0 |
21 | . | 1..C.G.121. | C3'-endo | ~C3'-endo | anti | 326.019 | 240.406 | 10.873 | 236.938 | 103.746 | 265.786 | 0.181 | |
22 | . | 1..C.C.122. | C3'-endo | ~C3'-endo | anti | 158.523 | 142.46 | 176.343 | 143.655 | 224.777 | 291.006 | 0.718 | |
23 | . | 1..C.A.123. | C3'-endo | ~C3'-endo | anti | 327.41 | 239.153 | 320.351 | 240.274 | 183.043 | 288.722 | 0.519 | |
24 | ) | 1..C.G.124. | C3'-endo | ~C3'-endo | anti | 157.096 | 212.85 | 183.769 | 214.797 | 261.243 | 232.598 | 0.776 | |
25 | ) | 1..C.C.125. | C3'-endo | ~C3'-endo | anti | 178.944 | 218.293 | 187.253 | 219.81 | 213.899 | 239.242 | 0.706 | |
26 | ) | 1..C.A.126. | C3'-endo | ~C3'-endo | anti | 164.55 | 239.944 | 179.526 | 230.638 | 212.85 | 252.832 | 0.971 | |
27 | . | 1..C.A.127. | C3'-endo | ~C3'-endo | anti | 169.62 | 204.104 | 187.772 | 213.077 | 230.864 | 269.68 | 0.801 | |
28 | . | 1..C.U.128. | C3'-endo | ~C3'-endo | anti | 182.83 | 119.534 | 203.36 | 108.275 | 269.263 | 116.583 | 0.696 | |
29 | ) | 1..C.C.129. | C3'-endo | ~C3'-endo | anti | 163.419 | 209.167 | 159.172 | 213.278 | 167.207 | 251.703 | 0.585 | |
30 | ) | 1..C.A.130. | C3'-endo | ~C3'-endo | anti | 154.937 | 196.241 | 178.07 | 199.61 | 234.64 | 223.713 | 0.483 | |
31 | ) | 1..C.U.131. | C3'-endo | ~C3'-endo | anti | 188.056 | 229.148 | 199.215 | 224.908 | 229.152 | 247.427 | 0.444 | |
32 | . | 1..C.U.132. | C3'-endo | ~C3'-endo | anti | 152.02 | 244.085 | 168.972 | 237.257 | 213.02 | 272.133 | 0.83 | |
33 | . | 1..C.U.133. | C3'-endo | ~C3'-endo | anti | 175.18 | 206.523 | 195.095 | 169.462 | 250.862 | 110.4 | 0.338 | |
34 | . | 1..C.A.134. | C3'-endo | ~C3'-endo | anti | 33.424 | 231.617 | 54.132 | 230.824 | 22.771 | 249.439 | 0.717 | |
35 | . | 1..C.A.135. | C3'-endo | ~C3'-endo | anti | 167.761 | 210.745 | 183.957 | 209.679 | 217.711 | 269.898 | 0.719 | |
36 | . | 1..C.A.136. | C3'-endo | ~C3'-endo | syn | 159.327 | 97.898 | 171.583 | 114.692 | 248.859 | 96.985 | 0.616 | |
37 | ( | 1..C.G.137. | C2'-exo | ~C3'-endo | anti | 197.521 | 260.061 | 181.683 | 251.879 | 164.271 | 254.175 | 0.384 | |
38 | . | 1..C.A.138. | *** | C2'-endo | ~C2'-endo | syn | 321.805 | 19.759 | 325.644 | 57.858 | 321.544 | 69.414 | 0 |
39 | . | 1..C.G.139. | C2'-endo | ~C2'-endo | anti | 212.911 | 228.34 | 220.013 | 199.32 | 218.804 | 205.245 | 0.104 | |
40 | . | 1..C.U.140. | C3'-endo | ~C3'-endo | anti | 107.387 | 216.973 | 120.608 | 210.614 | 144.674 | 233.384 | 0.017 | |
41 | ( | 1..C.G.141. | C3'-endo | ~C3'-endo | anti | 158.498 | 211.803 | 172.669 | 208.016 | 214.114 | 225.449 | 0.12 | |
42 | ( | 1..C.C.142. | C3'-endo | ~C3'-endo | anti | 164.987 | 226.829 | 178.645 | 231.034 | 214.116 | 274.05 | 0.546 | |
43 | . | 1..C.G.143. | C3'-endo | ~C3'-endo | anti | 176.501 | 218.26 | 198.664 | 217.39 | 262.488 | 221.897 | 0.761 | |
44 | . | 1..C.U.144. | C3'-endo | ~C3'-endo | anti | 162.895 | 239.424 | 171.158 | 198.916 | 186.394 | 142.1 | 0.898 | |
45 | . | 1..C.A.145. | C3'-endo | ~C3'-endo | anti | 27.196 | 231.669 | 51.439 | 230.387 | 25.389 | 275.324 | 0.637 | |
46 | . | 1..C.A.146. | C3'-endo | ~C3'-endo | anti | 151.909 | 251.706 | 172.673 | 235.81 | 238.877 | 240.576 | 0.805 | |
47 | . | 1..C.U.147. | C3'-endo | ~C3'-endo | anti | 165.852 | 211.381 | 178.112 | 228.451 | 205.854 | 276.261 | 0.096 | |
48 | . | 1..C.A.148. | C3'-endo | ~C3'-endo | anti | 169.649 | 243.321 | 205.604 | 246.186 | 277.329 | 287.73 | 0.4 | |
49 | ) | 1..C.G.149. | C3'-endo | ~C3'-endo | anti | 161.922 | 213.349 | 192.137 | 215.805 | 264.742 | 250.052 | 0.673 | |
50 | ) | 1..C.C.150. | C3'-endo | ~C3'-endo | anti | 168.129 | 229.545 | 180.072 | 230.804 | 228.216 | 257.073 | 0.912 | |
51 | . | 1..C.U.151. | C3'-endo | ~C3'-endo | anti | 169.76 | 192.099 | 190.687 | 194.633 | 238.254 | 218.158 | 0.693 | |
52 | ) | 1..C.C.152. | C3'-endo | ~C3'-endo | anti | 175.388 | 214.149 | 183.793 | 216.674 | 215.162 | 249.214 | 0.701 | |
53 | . | 1..C.A.153. | C3'-endo | ~C3'-endo | anti | 181.518 | 252.587 | 194.467 | 256.514 | 238.218 | 306.906 | 0.806 | |
54 | ) | 1..C.C.154. | C3'-endo | ~C3'-endo | anti | 154.463 | 218.911 | 185.705 | 219.591 | 262.733 | 235.85 | 0.626 | |
55 | ) | 1..C.U.155. | C3'-endo | ~C3'-endo | anti | 166.839 | 203.929 | 178.87 | 206.388 | 210.153 | 229.54 | 0.931 | |
56 | ) | 1..C.G.156. | C3'-endo | ~C3'-endo | anti | 165.578 | 215.266 | 175.949 | 216.166 | 211.486 | 240.152 | 0.909 | |
57 | ) | 1..C.G.157. | C3'-endo | ~C3'-endo | anti | 178.17 | 219.396 | 191.296 | 221.718 | 229.55 | 254.304 | 0.801 | |
58 | ) | 1..C.U.158. | C3'-endo | ~C3'-endo | anti | 0.774 | |||||||
59 | ( | 1..D.GTP.301. | C3'-endo | ~C3'-endo | anti | 0 | |||||||
60 | ( | 1..D.C.302. | C3'-endo | ~C3'-endo | anti | 161.059 | 212.066 | 180.824 | 213.959 | 240.662 | 239.558 | 0.743 | |
61 | ( | 1..D.C.303. | C3'-endo | ~C3'-endo | anti | 165.504 | 216.613 | 177.489 | 218.144 | 216.106 | 241.794 | 0.928 | |
62 | ( | 1..D.A.304. | C3'-endo | ~C3'-endo | anti | 168.673 | 226.612 | 183.475 | 219.981 | 222.625 | 242.456 | 0.806 | |
63 | ( | 1..D.G.305. | C3'-endo | ~C3'-endo | anti | 166.872 | 221.449 | 180.943 | 224.71 | 222.376 | 283.447 | 0.655 | |
64 | . | 1..D.G.306. | C3'-endo | ~C3'-endo | anti | 152.894 | 67.654 | 178.563 | 70.028 | 258.668 | 99.634 | 0.597 | |
65 | ( | 1..D.A.307. | C3'-endo | ~C3'-endo | anti | 169.881 | 219.388 | 189.559 | 215.134 | 191.191 | 233.87 | 0.166 | |
66 | ( | 1..D.U.308. | C3'-endo | ~C3'-endo | anti | 160.027 | 201.251 | 172.212 | 206.789 | 209.915 | 221.001 | 0.395 | |
67 | ( | 1..D.G.309. | C3'-endo | ~C3'-endo | anti | 176.035 | 326.158 | 182.662 | 289.715 | 200.376 | 244.167 | 0.888 | |
68 | . | 1..D.U.310. | C2'-endo | ~C2'-endo | anti | 64.582 | 170.129 | 125.727 | 109.664 | 113.108 | 95.612 | 0.756 | |
69 | . | 1..D.A.311. | *** | C2'-endo | ~C2'-endo | anti | 26.245 | 339.819 | 29.249 | 282.105 | 18.22 | 196.214 | 0.151 |
70 | ( | 1..D.U.312. | C3'-endo | ~C3'-endo | anti | 261.878 | 233.515 | 324.768 | 231.955 | 60.226 | 263.492 | 0.01 | |
71 | ( | 1..D.G.313. | C3'-endo | ~C3'-endo | anti | 164.292 | 229.368 | 180.432 | 232.635 | 235.979 | 260.459 | 0.893 | |
72 | ( | 1..D.C.314. | C3'-endo | ~C3'-endo | anti | 171.917 | 220.827 | 192.037 | 226.693 | 239.865 | 287.598 | 0.842 | |
73 | . | 1..D.U.315. | C3'-endo | ~C3'-endo | anti | 167.908 | 228.145 | 189.333 | 230.057 | 264.638 | 264.736 | 0.891 | |
74 | . | 1..D.U.316. | C3'-endo | ~C3'-endo | anti | 168.239 | 238.473 | 188.659 | 198.531 | 240.234 | 140.641 | 0.917 | |
75 | . | 1..D.A.317. | C3'-endo | ~C3'-endo | anti | 35.909 | 228.782 | 51.985 | 233.025 | 24.434 | 283.127 | 0.815 | |
76 | . | 1..D.G.318. | C3'-endo | ~C3'-endo | anti | 169.248 | 238.716 | 187.156 | 243.463 | 248.646 | 204.227 | 0.87 | |
77 | . | 1..D.A.319. | C2'-endo | ~C2'-endo | anti | 163.649 | 99.314 | 196.979 | 63.139 | 162.055 | 44.602 | 0.647 | |
78 | . | 1..D.A.320. | *** | C2'-endo | ~C2'-endo | anti | 137.196 | 9.816 | 132.711 | 330.931 | 112.399 | 250.721 | 0 |
79 | . | 1..D.G.321. | C3'-endo | ~C3'-endo | anti | 323.987 | 235.342 | 7.881 | 237.322 | 100.539 | 266.03 | 0.172 | |
80 | . | 1..D.C.322. | C3'-endo | ~C3'-endo | anti | 162.078 | 145.325 | 181.551 | 147.581 | 228.564 | 296.573 | 0.291 | |
81 | . | 1..D.A.323. | C3'-endo | ~C3'-endo | anti | 328.681 | 238.935 | 316.705 | 241.185 | 176.912 | 286.565 | 0.425 | |
82 | ) | 1..D.G.324. | C3'-endo | ~C3'-endo | anti | 162.928 | 215.365 | 188.523 | 216.238 | 260.648 | 239.619 | 0.838 | |
83 | ) | 1..D.C.325. | C3'-endo | ~C3'-endo | anti | 171.583 | 212.078 | 182.603 | 215.659 | 219.969 | 231.206 | 0.824 | |
84 | ) | 1..D.A.326. | C3'-endo | ~C3'-endo | anti | 166.158 | 240.399 | 178.781 | 232.45 | 205.278 | 257.641 | 0.945 | |
85 | . | 1..D.A.327. | C3'-endo | ~C3'-endo | anti | 174.145 | 206.001 | 192.46 | 213.691 | 238.732 | 268.282 | 0.78 | |
86 | . | 1..D.U.328. | C3'-endo | ~C3'-endo | anti | 179.049 | 116.177 | 199.659 | 104.049 | 264.204 | 112.484 | 0.649 | |
87 | ) | 1..D.C.329. | C3'-endo | ~C3'-endo | anti | 160.443 | 206.233 | 156.169 | 213.393 | 167.847 | 256.057 | 0.198 | |
88 | ) | 1..D.A.330. | C3'-endo | ~C3'-endo | anti | 161.108 | 212.14 | 181.852 | 213.422 | 239.332 | 226.476 | 0.428 | |
89 | ) | 1..D.U.331. | C3'-endo | ~C3'-endo | anti | 179.254 | 202.68 | 195.199 | 201.727 | 220.828 | 235.9 | 0.592 | |
90 | . | 1..D.U.332. | C3'-endo | ~C3'-endo | anti | 158.928 | 232.009 | 170.976 | 229.038 | 220.325 | 271.823 | 0.511 | |
91 | . | 1..D.U.333. | C3'-endo | ~C3'-endo | anti | 169.074 | 226.247 | 187.499 | 188.227 | 248.865 | 124.399 | 0.516 | |
92 | . | 1..D.A.334. | C3'-endo | ~C3'-endo | anti | 38.063 | 225.396 | 57.003 | 227.383 | 24.049 | 255.003 | 0.01 | |
93 | . | 1..D.A.335. | C3'-endo | ~C3'-endo | anti | 169.124 | 211.349 | 185.426 | 212.637 | 224.858 | 272.581 | 0.711 | |
94 | . | 1..D.A.336. | C3'-endo | ~C3'-endo | syn | 164.612 | 105.246 | 177.697 | 124.303 | 250.05 | 96.645 | 0.579 | |
95 | ( | 1..D.G.337. | C2'-exo | ~C3'-endo | anti | 194.806 | 262.223 | 174.468 | 250.788 | 156.353 | 249.516 | 0.076 | |
96 | . | 1..D.A.338. | *** | C2'-endo | ~C2'-endo | syn | 317.436 | 27.526 | 328.128 | 55.745 | 323.39 | 68.438 | 0 |
97 | . | 1..D.G.339. | C2'-endo | ~C2'-endo | anti | 209.41 | 224.105 | 216.96 | 202.158 | 219.13 | 204.969 | 0.385 | |
98 | . | 1..D.U.340. | C3'-endo | ~C3'-endo | anti | 115.531 | 218.394 | 125.497 | 210.271 | 144.105 | 238.203 | 0 | |
99 | ( | 1..D.G.341. | C3'-endo | ~C3'-endo | anti | 156.085 | 209.182 | 169.797 | 207.873 | 215.959 | 225.604 | 0.619 | |
100 | ( | 1..D.C.342. | C3'-endo | ~C3'-endo | anti | 167.916 | 225.596 | 183.352 | 232.551 | 217.941 | 282.419 | 0.817 | |
101 | . | 1..D.G.343. | C3'-endo | ~C3'-endo | anti | 174.095 | 215.214 | 198.613 | 213.647 | 267.214 | 218.002 | 0.758 | |
102 | . | 1..D.U.344. | C3'-endo | ~C3'-endo | anti | 160.943 | 239.445 | 167.976 | 197.951 | 183.068 | 141.776 | 0.821 | |
103 | . | 1..D.A.345. | C3'-endo | ~C3'-endo | anti | 28.605 | 231.156 | 53.15 | 228.988 | 25.843 | 271.576 | 0.516 | |
104 | . | 1..D.A.346. | C3'-endo | ~C3'-endo | anti | 156.836 | 247.569 | 176.132 | 232.77 | 239.455 | 250.399 | 0.588 | |
105 | . | 1..D.U.347. | C3'-endo | ~C3'-endo | anti | 159.711 | 213.407 | 174.13 | 229.487 | 214.181 | 273.267 | 0.509 | |
106 | . | 1..D.A.348. | C3'-endo | ~C3'-endo | anti | 171.309 | 240.101 | 206.186 | 241.639 | 273.048 | 286.483 | 0.596 | |
107 | ) | 1..D.G.349. | C3'-endo | ~C3'-endo | anti | 159.654 | 210.568 | 185.282 | 212.882 | 259.307 | 231.058 | 0.83 | |
108 | ) | 1..D.C.350. | C3'-endo | ~C3'-endo | anti | 171.703 | 225.958 | 180.882 | 229.9 | 211.452 | 268.8 | 0.932 | |
109 | . | 1..D.U.351. | C3'-endo | ~C3'-endo | anti | 169.444 | 205.473 | 192.895 | 207.458 | 253.997 | 230.88 | 0.902 | |
110 | ) | 1..D.C.352. | C3'-endo | ~C3'-endo | anti | 178.192 | 218.521 | 186.466 | 220.869 | 218.198 | 253.108 | 0.858 | |
111 | . | 1..D.A.353. | C3'-endo | ~C3'-endo | anti | 176.249 | 251.261 | 190.768 | 255.248 | 236.206 | 305.854 | 0.919 | |
112 | ) | 1..D.C.354. | C3'-endo | ~C3'-endo | anti | 151.031 | 209.964 | 181.926 | 211.106 | 257.862 | 222.652 | 0.546 | |
113 | ) | 1..D.U.355. | C3'-endo | ~C3'-endo | anti | 169.742 | 209.158 | 178.377 | 209.993 | 201.206 | 231.393 | 0.911 | |
114 | ) | 1..D.G.356. | C3'-endo | ~C3'-endo | anti | 167.25 | 214.767 | 178.914 | 216.738 | 213.981 | 240.7 | 0.919 | |
115 | ) | 1..D.G.357. | C3'-endo | ~C3'-endo | anti | 170.124 | 221.153 | 183.46 | 222.062 | 221.389 | 266.692 | 0.949 | |
116 | ) | 1..D.U.358. | C3'-endo | ~C3'-endo | anti | 0.624 |