4pkd: virtual backbone torsions, dot-bracket notation, sugar puckers, glycosidic bond, suiteness calculated using X3DNA-DSSR
# | dbn | Residue | PTPoutlier | puckering | sugar class | Glyco | Eta | Theta | Eta' | Theta' | Eta" | Theta" | Suiteness |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ( | 1..V.GTP.59. | C3'-endo | ~C3'-endo | anti | 0 | |||||||
2 | ( | 1..V.G.60. | O4'-endo | -- | anti | 173.72 | 219.209 | 190.124 | 208.547 | 229.224 | 223.897 | 0 | |
3 | ( | 1..V.A.61. | C3'-endo | ~C3'-endo | anti | 163.114 | 206.087 | 167.564 | 207.792 | 199.076 | 235.091 | 0.789 | |
4 | ( | 1..V.U.62. | C3'-endo | ~C3'-endo | anti | 163.36 | 211.051 | 173.735 | 209.931 | 211.84 | 231.669 | 0.483 | |
5 | ( | 1..V.C.63. | C3'-endo | ~C3'-endo | anti | 165.484 | 216.751 | 178.282 | 214.273 | 215.264 | 248.381 | 0.334 | |
6 | ( | 1..V.C.64. | C3'-endo | ~C3'-endo | anti | 163.555 | 207.492 | 176.496 | 209.75 | 229.424 | 249.484 | 0.505 | |
7 | . | 1..V.A.65. | C3'-endo | ~C3'-endo | anti | 168.64 | 216.143 | 179.314 | 221.207 | 232.899 | 254.22 | 0.415 | |
8 | . | 1..V.U.66. | C3'-endo | ~C3'-endo | anti | 174.128 | 207.496 | 191.351 | 221.459 | 239.28 | 225.348 | 0.514 | |
9 | . | 1..V.U.67. | C2'-endo | ~C2'-endo | anti | 230.086 | 99.82 | 231.461 | 82.037 | 222.25 | 67.221 | 0.908 | |
10 | . | 1..V.G.68. | C3'-endo | ~C3'-endo | anti | 144.715 | 228.869 | 152.619 | 232.363 | 140.404 | 251.44 | 0.089 | |
11 | . | 1..V.C.69. | C2'-endo | ~C2'-endo | anti | 232.22 | 140.737 | 251.646 | 124.076 | 236.829 | 140.745 | 0.617 | |
12 | . | 1..V.A.70. | C3'-endo | ~C3'-endo | anti | 180.23 | 224.092 | 180.758 | 220.564 | 187.973 | 257.918 | 0.36 | |
13 | . | 1..V.C.71. | C3'-endo | ~C3'-endo | anti | 170.258 | 91.598 | 183.922 | 67.035 | 238.79 | 298.828 | 0.138 | |
14 | . | 1..V.U.72. | *** | C3'-endo | ~C3'-endo | anti | 346.413 | 160.374 | 357.306 | 168.108 | 125.177 | 173.056 | 0 |
15 | . | 1..V.C.73. | C3'-endo | ~C3'-endo | syn | 175.269 | 222.998 | 164.607 | 235.649 | 160.308 | 230.834 | 0 | |
16 | . | 1..V.C.74. | C2'-exo | ~C3'-endo | anti | 154.801 | 187.897 | 189.03 | 178.609 | 203.305 | 187.678 | 0.235 | |
17 | ) | 1..V.G.75. | C2'-exo | ~C3'-endo | anti | 335.128 | 195.76 | 328.71 | 196.816 | 301.423 | 220.994 | 0 | |
18 | ) | 1..V.G.76. | C3'-endo | ~C3'-endo | anti | 175.328 | 216.281 | 187.248 | 221.008 | 222.647 | 232.018 | 0.027 | |
19 | ) | 1..V.A.77. | C3'-endo | ~C3'-endo | anti | 179.44 | 217.034 | 192.947 | 216.698 | 212.991 | 245.992 | 0.129 | |
20 | ) | 1..V.U.78. | C3'-endo | ~C3'-endo | anti | 154.891 | 208.727 | 168.211 | 208.83 | 212.174 | 240.229 | 0.57 | |
21 | ) | 1..V.C.79. | C3'-endo | ~C3'-endo | anti | 162.497 | 203.328 | 178.583 | 201.957 | 226.921 | 221.936 | 0.632 | |
22 | ) | 1..V.C.80. | C3'-endo | ~C3'-endo | anti | 170.143 | 199.764 | 178.626 | 203.126 | 211.75 | 225.531 | 0.804 | |
23 | ( | 1..V.A.81. | C3'-endo | ~C3'-endo | anti | 174.951 | 217.332 | 179.649 | 218.832 | 208.421 | 246.108 | 0 | |
24 | ( | 1..V.G.82. | C3'-endo | ~C3'-endo | anti | 160.61 | 215.065 | 175.346 | 214.837 | 220.178 | 242.452 | 0.873 | |
25 | ( | 1..V.G.83. | C3'-endo | ~C3'-endo | anti | 172.707 | 213.181 | 185.371 | 218.053 | 229.955 | 240.499 | 0.25 | |
26 | ( | 1..V.A.84. | C3'-endo | ~C3'-endo | anti | 166.61 | 227.912 | 181.482 | 212.927 | 216.728 | 220.539 | 0.593 | |
27 | ( | 1..V.G.85. | C2'-exo | ~C3'-endo | anti | 166.994 | 193.536 | 170.916 | 209.363 | 197.967 | 250.896 | 0 | |
28 | ( | 1..V.A.86. | C3'-endo | ~C3'-endo | anti | 172.193 | 235.53 | 196.432 | 225.591 | 246.33 | 264.298 | 0 | |
29 | . | 1..V.U.87. | C2'-exo | ~C3'-endo | anti | 162.2 | 112.4 | 175.123 | 112.497 | 236.413 | 85.55 | 0 | |
30 | . | 1..V.A.88. | *** | C1'-exo | ~C2'-endo | anti | 142.636 | 284.835 | 139.24 | 275.752 | 121.422 | 310.648 | 0 |
31 | ( | 1..V.C.89. | C3'-endo | ~C3'-endo | anti | 141.636 | 210.23 | 181.845 | 213.027 | 227.139 | 234.105 | 0.195 | |
32 | ( | 1..V.C.90. | C3'-endo | ~C3'-endo | anti | 164.521 | 207.874 | 173.305 | 212.058 | 206.261 | 237.788 | 0.868 | |
33 | ( | 1..V.A.91. | C3'-endo | ~C3'-endo | anti | 176.099 | 225.974 | 185.607 | 226.401 | 219.228 | 268.28 | 0.826 | |
34 | ( | 1..V.U.92. | C3'-endo | ~C3'-endo | anti | 158.424 | 1.801 | 178.581 | 345.252 | 240.371 | 311.499 | 0.83 | |
35 | . | 1..V.G.93. | C4'-exo | -- | syn | 225.785 | 343.617 | 252.208 | 2.143 | 321.182 | 305.432 | 0 | |
36 | . | 1..V.A.94. | *** | C2'-endo | ~C2'-endo | anti | 249.618 | 319.498 | 277.01 | 249.333 | 345.558 | 205 | 0 |
37 | . | 1..V.U.95. | *** | C2'-endo | ~C2'-endo | anti | 296.966 | 164.036 | 20.96 | 161.703 | 61.312 | 156.744 | 0.01 |
38 | . | 1..V.C.96. | C2'-endo | ~C2'-endo | anti | 185.177 | 128.858 | 185.806 | 117.52 | 175.145 | 133.474 | 0.121 | |
39 | . | 1..V.A.97. | C2'-endo | ~C2'-endo | anti | 192.433 | 115.736 | 212.629 | 57.247 | 206.461 | 349.278 | 0.248 | |
40 | . | 1..V.C.98. | C3'-endo | ~C3'-endo | anti | 335.963 | 208.599 | 348.975 | 210.54 | 60.082 | 289.993 | 0.321 | |
41 | . | 1..V.G.99. | C1'-exo | ~C2'-endo | syn | 198.038 | 262.059 | 213.764 | 247.341 | 292.11 | 235.176 | 0.766 | |
42 | . | 1..V.A.100. | C3'-endo | ~C3'-endo | anti | 253.829 | 172.002 | 266.685 | 193.536 | 259.142 | 267.419 | 0 | |
43 | . | 1..V.A.101. | C2'-exo | ~C3'-endo | anti | 157.684 | 247.875 | 182.288 | 254.407 | 263.637 | 290.233 | 0.567 | |
44 | . | 1..V.G.102. | C3'-endo | ~C3'-endo | anti | 165.776 | 221.309 | 205.6 | 216.842 | 270.808 | 261.928 | 0.04 | |
45 | ) | 1..V.G.103. | C3'-endo | ~C3'-endo | anti | 163.871 | 224.087 | 182.834 | 225.601 | 249.755 | 264.565 | 0.934 | |
46 | ) | 1..V.U.104. | C3'-endo | ~C3'-endo | anti | 162.719 | 218.023 | 179.067 | 218.574 | 236.574 | 240.796 | 0.597 | |
47 | ) | 1..V.G.105. | C3'-endo | ~C3'-endo | anti | 165.108 | 234.223 | 177.497 | 224.047 | 215.106 | 245.879 | 0.515 | |
48 | ) | 1..V.G.106. | C2'-exo | ~C3'-endo | anti | 170.781 | 199.477 | 181.716 | 211.645 | 223.717 | 264.323 | 0 | |
49 | . | 1..V.U.107. | C3'-endo | ~C3'-endo | anti | 161.818 | 219.03 | 186.23 | 222.339 | 252.127 | 262.152 | 0.689 | |
50 | ) | 1..V.U.108. | C3'-endo | ~C3'-endo | anti | 164.483 | 222.552 | 182.277 | 221.44 | 238.169 | 251.262 | 0.873 | |
51 | ) | 1..V.U.109. | C3'-endo | ~C3'-endo | anti | 167.381 | 198.31 | 186.101 | 195.493 | 236.083 | 199.762 | 0.826 | |
52 | ) | 1..V.U.110. | C3'-endo | ~C3'-endo | anti | 168.003 | 218.372 | 172.205 | 211.694 | 186.394 | 235.457 | 0.1 | |
53 | ) | 1..V.C.111. | C2'-exo | ~C3'-endo | anti | 169.599 | 207.675 | 179.941 | 214.17 | 220.55 | 240.714 | 0.393 | |
54 | ) | 1..V.C.112. | C3'-endo | ~C3'-endo | anti | 166.218 | 217.009 | 185.216 | 219.722 | 224.572 | 244.845 | 0.047 | |
55 | ) | 1..V.U.113. | C3'-endo | ~C3'-endo | anti | 0 |