5cd4: virtual backbone torsions, dot-bracket notation, sugar puckers, glycosidic bond, suiteness calculated using X3DNA-DSSR
# | dbn | Residue | PTPoutlier | puckering | sugar class | Glyco | Eta | Theta | Eta' | Theta' | Eta" | Theta" | Suiteness |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | . | 1..L.A.1. | C3'-endo | ~C3'-endo | anti | 0 | |||||||
2 | . | 1..L.U.2. | C2'-endo | ~C2'-endo | anti | 190.933 | 322.061 | 192.879 | 276.193 | 171.762 | 177.267 | 0.453 | |
3 | . | 1..L.A.3. | *** | C2'-endo | ~C2'-endo | syn | 312.924 | 33.717 | 356.842 | 41.416 | 89.427 | 62.598 | 0.172 |
4 | . | 1..L.A.4. | C3'-endo | ~C3'-endo | anti | 162.984 | 224.452 | 174.499 | 229.26 | 216.838 | 271.314 | 0 | |
5 | . | 1..L.A.5. | C3'-endo | ~C3'-endo | anti | 181.265 | 233.157 | 197.431 | 233.046 | 248.435 | 244.135 | 0.851 | |
6 | . | 1..L.C.6. | C3'-endo | ~C3'-endo | anti | 158.14 | 247.861 | 172.374 | 259.953 | 192.936 | 304.6 | 0.184 | |
7 | . | 1..L.C.7. | C2'-endo | ~C2'-endo | anti | 182.404 | 303.131 | 226.365 | 254.34 | 271.041 | 183.167 | 0.338 | |
8 | . | 1..L.G.8. | C4'-exo | ~C3'-endo | syn | 287.89 | 256.004 | 332.267 | 239.452 | 53.845 | 232.114 | 0.39 | |
9 | . | 1..L.A.9. | C2'-endo | ~C2'-endo | anti | 285.926 | 149.051 | 309.648 | 138.491 | 305.469 | 159.447 | 0 | |
10 | . | 1..L.C.10. | C3'-endo | ~C3'-endo | anti | 159.391 | 174.215 | 146.526 | 186.898 | 174.033 | 216.331 | 0.764 | |
11 | . | 1..L.G.11. | C3'-endo | ~C3'-endo | anti | 170.633 | 226.283 | 182.003 | 222.349 | 208.594 | 213.684 | 0.159 | |
12 | . | 1..L.G.12. | C3'-endo | ~C3'-endo | anti | 162.065 | 203.669 | 170.492 | 215.132 | 171.693 | 209.513 | 0.669 | |
13 | . | 1..L.U.13. | C2'-endo | ~C2'-endo | anti | 206.272 | 287.092 | 218.655 | 232.42 | 204.503 | 189.279 | 0.433 | |
14 | . | 1..L.A.14. | C4'-exo | ~C3'-endo | syn | 334.82 | 238.008 | 19.189 | 233.489 | 77.253 | 230.337 | 0 | |
15 | . | 1..L.U.15. | *** | C2'-endo | ~C2'-endo | anti | 283.908 | 146.758 | 305.04 | 140.325 | 301.594 | 167.852 | 0 |
16 | . | 1..L.U.16. | C3'-endo | ~C3'-endo | anti | 159.787 | 174.665 | 149.515 | 184.879 | 183.18 | 196.275 | 0.77 | |
17 | . | 1..L.G.17. | C3'-endo | ~C3'-endo | anti | 165.692 | 216.484 | 173.783 | 218.061 | 186.166 | 227.616 | 0.303 | |
18 | . | 1..L.U.18. | C3'-endo | ~C3'-endo | anti | 170.283 | 209.296 | 176.168 | 221.136 | 187.839 | 231.916 | 0.772 | |
19 | . | 1..L.U.19. | C2'-endo | ~C2'-endo | anti | 202.503 | 295.642 | 223.237 | 235.768 | 228.516 | 188.948 | 0.706 | |
20 | . | 1..L.C.20. | C3'-endo | ~C3'-endo | syn | 327.986 | 241.609 | 15.936 | 233.122 | 75.698 | 226.694 | 0.418 | |
21 | . | 1..L.A.21. | *** | C2'-endo | ~C2'-endo | anti | 283.733 | 151.302 | 304.432 | 142.042 | 297.506 | 178.87 | 0 |
22 | . | 1..L.G.22. | C3'-endo | ~C3'-endo | anti | 158.861 | 173.344 | 148.115 | 184.917 | 192.194 | 199.56 | 0.711 | |
23 | . | 1..L.A.23. | C3'-endo | ~C3'-endo | anti | 165.933 | 221.377 | 175.648 | 220.967 | 191.089 | 226.922 | 0.346 | |
24 | . | 1..L.U.24. | C3'-endo | ~C3'-endo | anti | 169.425 | 205.22 | 175.486 | 217.433 | 186.286 | 216.315 | 0.815 | |
25 | . | 1..L.C.25. | C2'-endo | ~C2'-endo | anti | 204.005 | 289.715 | 221.07 | 232.615 | 212.402 | 190.759 | 0.662 | |
26 | . | 1..L.C.26. | C3'-endo | ~C3'-endo | syn | 332.878 | 241.307 | 18.648 | 233.144 | 78.101 | 230.314 | 0 | |
27 | . | 1..L.U.27. | *** | C2'-endo | ~C2'-endo | anti | 279.731 | 143.041 | 300.554 | 133.234 | 298.194 | 157.003 | 0 |
28 | . | 1..L.G.28. | C3'-endo | ~C3'-endo | anti | 155.716 | 181.918 | 142.713 | 192.476 | 173.874 | 222.199 | 0.54 | |
29 | . | 1..L.G.29. | C3'-endo | ~C3'-endo | anti | 165.522 | 216.43 | 177.559 | 219.06 | 209.573 | 231.221 | 0.081 | |
30 | . | 1..L.C.30. | C3'-endo | ~C3'-endo | anti | 171.009 | 215.877 | 178.272 | 223.351 | 193.577 | 226.099 | 0.631 | |
31 | . | 1..L.U.31. | C2'-endo | ~C2'-endo | anti | 227.548 | 269.3 | 225.288 | 232.895 | 219.738 | 191.752 | 0.098 | |
32 | . | 1..L.U.32. | C3'-endo | ~C3'-endo | syn | 323.692 | 240.001 | 15.496 | 234.442 | 77.776 | 229.414 | 0 | |
33 | . | 1..L.G.33. | *** | C2'-endo | ~C2'-endo | anti | 281.582 | 141.781 | 299.541 | 135.098 | 295.19 | 150.585 | 0 |
34 | . | 1..L.C.34. | C3'-endo | ~C3'-endo | anti | 141.721 | 183.07 | 133.355 | 192.015 | 159.664 | 220.819 | 0.56 | |
35 | . | 1..L.C.35. | C3'-endo | ~C3'-endo | anti | 176.799 | 221.868 | 187.773 | 229.445 | 218.483 | 249.747 | 0.944 | |
36 | . | 1..L.A.36. | C3'-endo | ~C3'-endo | anti | 172.907 | 211.024 | 181.34 | 220.904 | 202.416 | 204.495 | 0.648 | |
37 | . | 1..L.A.37. | C2'-endo | ~C2'-endo | anti | 207.161 | 286.817 | 226.185 | 232.804 | 201.364 | 185.323 | 0.864 | |
38 | . | 1..L.C.38. | C3'-endo | ~C3'-endo | anti | 327.839 | 243.803 | 13.311 | 232.379 | 70.429 | 246.454 | 0 | |
39 | . | 1..L.A.39. | *** | C2'-endo | ~C2'-endo | anti | 284.473 | 132.464 | 306.123 | 143.878 | 310.086 | 223.278 | 0 |
40 | . | 1..L.G.40. | *** | C2'-endo | ~C2'-endo | -- | 152.436 | 220.283 | 167.549 | 192.914 | 254.886 | 216.929 | 0 |
41 | . | 1..L.G.41. | C3'-endo | ~C3'-endo | syn | 175.326 | 234.554 | 171.567 | 243.335 | 211.972 | 287.691 | 0 | |
42 | . | 1..L.A.42. | C4'-exo | -- | syn | 194.394 | 235.602 | 219.247 | 239.71 | 272.085 | 206.925 | 0 | |
43 | . | 1..L.G.43. | C3'-endo | ~C3'-endo | syn | 274.824 | 195.534 | 302.731 | 219.808 | 303.931 | 226.892 | 0 | |
44 | . | 1..L.U.44. | C2'-endo | ~C2'-endo | anti | 229.946 | 177.917 | 241.383 | 122.151 | 215.389 | 94.31 | 0.119 | |
45 | . | 1..L.U.45. | *** | C2'-endo | ~C2'-endo | anti | 66.881 | 132.659 | 57.575 | 118.41 | 40.616 | 126.236 | 0.081 |
46 | ( | 1..L.C.46. | C3'-endo | ~C3'-endo | anti | 140.807 | 211.297 | 131.876 | 213.004 | 143.84 | 231.193 | 0 | |
47 | ( | 1..L.C.47. | C3'-endo | ~C3'-endo | anti | 173.796 | 212.007 | 180.156 | 209.317 | 206.829 | 229.012 | 0 | |
48 | ( | 1..L.C.48. | C3'-endo | ~C3'-endo | anti | 173.362 | 207.597 | 182.644 | 211.76 | 215.639 | 246.502 | 0.747 | |
49 | ( | 1..L.C.49. | C3'-endo | ~C3'-endo | anti | 161.201 | 208.213 | 179.597 | 208.607 | 229.615 | 216.689 | 0.742 | |
50 | ( | 1..L.G.50. | C3'-endo | ~C3'-endo | anti | 166.953 | 211.402 | 173.826 | 214.552 | 193.49 | 244.496 | 0.25 | |
51 | ( | 1..L.C.51. | C3'-endo | ~C3'-endo | anti | 168.594 | 230.291 | 180.297 | 219.575 | 222.775 | 269.35 | 0.717 | |
52 | . | 1..L.G.52. | C3'-endo | ~C3'-endo | syn | 195.915 | 218.385 | 198.194 | 226.663 | 268.646 | 212.886 | 0 | |
53 | . | 1..L.C.53. | C3'-endo | ~C3'-endo | anti | 168.098 | 165.268 | 196.795 | 155.992 | 203.181 | 188.949 | 0 | |
54 | . | 1..L.C.54. | C2'-endo | ~C2'-endo | syn | 22.79 | 293.953 | 11.367 | 289.176 | 312.57 | 320.595 | 0 | |
55 | . | 1..L.A.55. | C3'-endo | ~C3'-endo | anti | 187.543 | 212.146 | 220.376 | 236.569 | 218.616 | 251.552 | 0 | |
56 | ) | 1..L.G.56. | C3'-endo | ~C3'-endo | anti | 190.386 | 172.547 | 228.801 | 177.033 | 259.851 | 202.035 | 0 | |
57 | ) | 1..L.C.57. | C3'-endo | ~C3'-endo | anti | 170.27 | 230.198 | 178.62 | 224.691 | 211.721 | 247.567 | 0.08 | |
58 | ) | 1..L.G.58. | C3'-endo | ~C3'-endo | anti | 168.165 | 185.148 | 184.365 | 191.909 | 227.103 | 221.959 | 0.936 | |
59 | ) | 1..L.G.59. | C3'-endo | ~C3'-endo | anti | 172.591 | 238.75 | 184.528 | 228.382 | 222.563 | 247.634 | 0.228 | |
60 | ) | 1..L.G.60. | C3'-endo | ~C3'-endo | anti | 164.836 | 201.693 | 177.797 | 210.006 | 217.35 | 237.752 | 0.415 | |
61 | ) | 1..L.23G.61. | C4'-exo | -- | anti | 0.01 | |||||||
62 | . | 1..X.A.1. | C3'-endo | ~C3'-endo | anti | 0 | |||||||
63 | . | 1..X.U.2. | C2'-endo | ~C2'-endo | anti | 191.03 | 323.664 | 192.339 | 278.902 | 169.632 | 176.662 | 0.452 | |
64 | . | 1..X.A.3. | *** | C2'-endo | ~C2'-endo | syn | 311.413 | 34.4 | 353.993 | 42.681 | 90.956 | 64.271 | 0.151 |
65 | . | 1..X.A.4. | C3'-endo | ~C3'-endo | anti | 164.31 | 224.054 | 175.134 | 228.794 | 217.2 | 273.445 | 0 | |
66 | . | 1..X.A.5. | C3'-endo | ~C3'-endo | anti | 180.627 | 235.753 | 196.734 | 235.684 | 250.236 | 248.823 | 0.839 | |
67 | . | 1..X.C.6. | C3'-endo | ~C3'-endo | anti | 157.781 | 246.504 | 172.995 | 258.277 | 196.17 | 302.022 | 0.173 | |
68 | . | 1..X.C.7. | C2'-endo | ~C2'-endo | anti | 182.505 | 303.307 | 225.538 | 256.083 | 269.57 | 185.093 | 0.351 | |
69 | . | 1..X.G.8. | C4'-exo | ~C3'-endo | syn | 285.719 | 257.051 | 329.1 | 240.973 | 51.218 | 234.14 | 0.405 | |
70 | . | 1..X.A.9. | C2'-endo | ~C2'-endo | anti | 285.054 | 149.763 | 309.7 | 138.63 | 306.333 | 155.128 | 0 | |
71 | . | 1..X.C.10. | C3'-endo | ~C3'-endo | anti | 159.227 | 172.24 | 145.826 | 185.422 | 168.876 | 217.296 | 0.774 | |
72 | . | 1..X.G.11. | C3'-endo | ~C3'-endo | anti | 170.717 | 228.101 | 182.627 | 224.017 | 211.723 | 222.236 | 0.159 | |
73 | . | 1..X.G.12. | C3'-endo | ~C3'-endo | anti | 161.998 | 205.141 | 171.201 | 215.81 | 180.145 | 206.436 | 0.672 | |
74 | . | 1..X.U.13. | C2'-endo | ~C2'-endo | anti | 204.519 | 288.025 | 217.226 | 233.452 | 200.473 | 189.694 | 0.447 | |
75 | . | 1..X.A.14. | C4'-exo | ~C3'-endo | syn | 333.26 | 237.548 | 17.952 | 232.694 | 77.147 | 227.715 | 0 | |
76 | . | 1..X.U.15. | *** | C2'-endo | ~C2'-endo | anti | 284.764 | 146.344 | 305.508 | 139.738 | 300.057 | 168.961 | 0 |
77 | . | 1..X.U.16. | C3'-endo | ~C3'-endo | anti | 159.569 | 175.729 | 149.297 | 185.973 | 184.821 | 202.976 | 0.767 | |
78 | . | 1..X.G.17. | C3'-endo | ~C3'-endo | anti | 165.452 | 216.688 | 174.147 | 217.894 | 192.322 | 225.535 | 0.309 | |
79 | . | 1..X.U.18. | C3'-endo | ~C3'-endo | anti | 170.077 | 209.442 | 175.569 | 221.199 | 185.796 | 230.475 | 0.774 | |
80 | . | 1..X.U.19. | C2'-endo | ~C2'-endo | anti | 202.659 | 294.161 | 222.958 | 234.818 | 226.807 | 188.468 | 0.707 | |
81 | . | 1..X.C.20. | C3'-endo | ~C3'-endo | syn | 328.848 | 241.954 | 16.425 | 233.692 | 75.493 | 227.858 | 0.407 | |
82 | . | 1..X.A.21. | *** | C2'-endo | ~C2'-endo | anti | 284.403 | 150.518 | 305.056 | 141.351 | 298.827 | 179.263 | 0 |
83 | . | 1..X.G.22. | C3'-endo | ~C3'-endo | anti | 159.973 | 173.549 | 148.787 | 185.262 | 193.706 | 200.385 | 0.692 | |
84 | . | 1..X.A.23. | C3'-endo | ~C3'-endo | anti | 164.448 | 219.872 | 174.417 | 219.199 | 190.601 | 222.088 | 0.329 | |
85 | . | 1..X.U.24. | C3'-endo | ~C3'-endo | anti | 168.96 | 204.931 | 173.666 | 217.416 | 181.359 | 222.518 | 0.802 | |
86 | . | 1..X.C.25. | C2'-endo | ~C2'-endo | anti | 205.256 | 291.341 | 223.082 | 234.107 | 220.058 | 192.074 | 0.674 | |
87 | . | 1..X.C.26. | C3'-endo | ~C3'-endo | syn | 332.156 | 242.217 | 18.072 | 235.09 | 77.702 | 236.455 | 0 | |
88 | . | 1..X.U.27. | *** | C2'-endo | ~C2'-endo | anti | 278.883 | 143.353 | 299.99 | 135.2 | 302.309 | 163.951 | 0 |
89 | . | 1..X.G.28. | C3'-endo | ~C3'-endo | anti | 157.898 | 181.191 | 145.816 | 192.465 | 181.593 | 227.36 | 0.546 | |
90 | . | 1..X.G.29. | C3'-endo | ~C3'-endo | anti | 167.261 | 216.948 | 179.378 | 219.133 | 215.831 | 229.194 | 0.085 | |
91 | . | 1..X.C.30. | C3'-endo | ~C3'-endo | anti | 168.893 | 214.21 | 176.364 | 221.691 | 190.689 | 223.749 | 0.626 | |
92 | . | 1..X.U.31. | C2'-endo | ~C2'-endo | anti | 227.896 | 269.38 | 225.282 | 233.132 | 218.878 | 192.331 | 0.103 | |
93 | . | 1..X.U.32. | C3'-endo | ~C3'-endo | syn | 324.03 | 239.682 | 15.652 | 233.678 | 77.351 | 226.956 | 0 | |
94 | . | 1..X.G.33. | *** | C2'-endo | ~C2'-endo | anti | 281.82 | 139.519 | 299.735 | 132.772 | 293.216 | 145.872 | 0 |
95 | . | 1..X.C.34. | C3'-endo | ~C3'-endo | anti | 144.224 | 182.835 | 134.28 | 192.166 | 157.553 | 223.795 | 0.529 | |
96 | . | 1..X.C.35. | C3'-endo | ~C3'-endo | anti | 175.941 | 224.147 | 187.285 | 231.812 | 221.033 | 248.164 | 0.945 | |
97 | . | 1..X.A.36. | C3'-endo | ~C3'-endo | anti | 171.689 | 207.945 | 180.041 | 217.624 | 197.535 | 201.41 | 0.596 | |
98 | . | 1..X.A.37. | C2'-endo | ~C2'-endo | anti | 210.034 | 289.24 | 227.507 | 235.364 | 201.474 | 185.647 | 0.847 | |
99 | . | 1..X.C.38. | C3'-endo | ~C3'-endo | anti | 326.084 | 246.416 | 13.308 | 236.114 | 73.735 | 251.948 | 0 | |
100 | . | 1..X.A.39. | *** | C2'-endo | ~C2'-endo | anti | 283.543 | 128.449 | 306.871 | 139.874 | 313.502 | 200.2 | 0 |
101 | . | 1..X.G.40. | *** | C2'-endo | ~C2'-endo | -- | 148.26 | 222.156 | 158.931 | 205.937 | 226.954 | 226.244 | 0 |
102 | . | 1..X.G.41. | C2'-endo | ~C2'-endo | -- | 176.355 | 237.392 | 191.595 | 236.056 | 224.574 | 255.082 | 0 | |
103 | . | 1..X.A.42. | C1'-exo | -- | anti | 154.172 | 252.946 | 192.641 | 236.462 | 224.86 | 208.37 | 0 | |
104 | . | 1..X.G.43. | C3'-endo | ~C3'-endo | syn | 281.394 | 193.421 | 301.207 | 219.195 | 326.485 | 227.895 | 0 | |
105 | . | 1..X.U.44. | C2'-endo | ~C2'-endo | anti | 233.197 | 177.107 | 243.428 | 120.087 | 214.507 | 91.645 | 0.097 | |
106 | . | 1..X.U.45. | *** | C2'-endo | ~C2'-endo | anti | 68.013 | 130.432 | 57.69 | 117.811 | 42.425 | 128.614 | 0.084 |
107 | ( | 1..X.C.46. | C3'-endo | ~C3'-endo | anti | 143.055 | 210.321 | 134.715 | 211.36 | 148.521 | 230.137 | 0 | |
108 | ( | 1..X.C.47. | C3'-endo | ~C3'-endo | anti | 167.138 | 212.556 | 173.73 | 211.013 | 203.814 | 222.136 | 0 | |
109 | ( | 1..X.C.48. | C3'-endo | ~C3'-endo | anti | 188.294 | 229.054 | 196.85 | 220 | 219.565 | 255.074 | 0.592 | |
110 | ( | 1..X.C.49. | C3'-endo | ~C3'-endo | anti | 142.915 | 192.987 | 168.053 | 197.884 | 226.123 | 218.626 | 0.373 | |
111 | ( | 1..X.G.50. | C3'-endo | ~C3'-endo | anti | 168.616 | 217.263 | 181.22 | 220.618 | 211.941 | 252.648 | 0.248 | |
112 | ( | 1..X.C.51. | C3'-endo | ~C3'-endo | anti | 170.103 | 233.821 | 185.146 | 229.183 | 232.196 | 264.284 | 0.745 | |
113 | . | 1..X.G.52. | C3'-endo | ~C3'-endo | anti | 162.207 | 178.725 | 184.554 | 144.752 | 244.891 | 93.981 | 0.663 | |
114 | . | 1..X.C.53. | *** | C2'-endo | ~C2'-endo | anti | 64.529 | 352.302 | 102.103 | 305.662 | 76.523 | 318.449 | 0.227 |
115 | . | 1..X.C.54. | C2'-endo | ~C2'-endo | anti | 191.262 | 87.366 | 226.056 | 70.071 | 251.215 | 61.019 | 0 | |
116 | . | 1..X.A.55. | C3'-endo | ~C3'-endo | anti | 133.801 | 220.775 | 119.467 | 232.101 | 123.411 | 267.88 | 0.561 | |
117 | ) | 1..X.G.56. | C3'-endo | ~C3'-endo | anti | 173.353 | 198.174 | 215.454 | 188.288 | 277.334 | 194.252 | 0 | |
118 | ) | 1..X.C.57. | C3'-endo | ~C3'-endo | anti | 175.042 | 226.305 | 180.634 | 220.119 | 198.29 | 239.855 | 0.103 | |
119 | ) | 1..X.G.58. | C3'-endo | ~C3'-endo | anti | 168.879 | 186.634 | 183.549 | 192.838 | 222.66 | 219.955 | 0.945 | |
120 | ) | 1..X.G.59. | C3'-endo | ~C3'-endo | anti | 172.066 | 245.037 | 184.32 | 234.251 | 219.668 | 250.304 | 0.236 | |
121 | ) | 1..X.G.60. | C3'-endo | ~C3'-endo | anti | 169.658 | 196.548 | 182.919 | 202.978 | 220.664 | 243.502 | 0.01 | |
122 | ) | 1..X.23G.61. | C4'-exo | -- | anti | 0 |